In file MCSimulation.C:

void MCpfoldComputation

(Protein* foldedP, Protein* unfoldedP,
  Protein* startP, float minDistFolded,
  float minDistUnfolded, int maxIter,
  int maxNumMCSimulations,
  int startIndex)

computes pfold for node # startIndex

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computes pfold for node # startIndex

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