ioRoutines.C


o readNodeCoords
reads node coords from filename.
o readPresampledConformations
reads pfold100MCtxt and returns nativeNodeIndex, which is 101
o printPath
prints dist.
o printPfolds
normally this function should be in analysisC but for some reason it does not link there
o linkNodesStatPrintOuts
o printCloseNodeIndices
prints the indices of nodes that are close to the folded or unfolded nodes in a file, in 1-based format.
o writeConnections
o writeTransitionProbabilities
writes the edge transition probabilities to a file titled filename
o writeNodes
to stdout
o writeNodes
o reportTimes
o handleInput

Alphabetic index



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