In file roadmapConstruction.C:

void reorderEnergiesAndConfigs

(const vector<float>& E,
  const vector<int>& next,
  const vector<vector<float> > &configs,
  vector<float>& OrderedE,
  vector<vector<float> >& orderedConfigs)

configs has the dof parameters defining the conformations, in non-ordered fashion.

Documentation

configs has the dof parameters defining the conformations, in non-ordered fashion. orderedConfigs holds the ordered parameters of the intermed configs including start and end configs of the edge.

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