Repressed experiments for module 14

Experiment nameClinical attributes
Armstrong01_ALL_7Acute lymphocytic leukemia (Leukemia), B cells (Leukemia), Bone marrow (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*), Acute lymphocytic leukemia - ALL1 sub class (Leukemia)
Armstrong01_ALL_9Acute lymphocytic leukemia (Leukemia), B cells (Leukemia), Bone marrow (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*), Acute lymphocytic leukemia - ALL1 sub class (Leukemia)
Armstrong01_MLL_12Acute lymphocytic leukemia (Leukemia), B cells (Leukemia), Bone marrow (Leukemia), Lymphocytes (Leukemia), Acute lymphocytic leukemia - MLL sub class (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*), Acute lymphocytic leukemia - relapse (Leukemia)
Armstrong01_MLL__1Acute lymphocytic leukemia (Leukemia), B cells (Leukemia), Bone marrow (Leukemia), Lymphocytes (Leukemia), Acute lymphocytic leukemia - MLL sub class (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*)
Boldrick02_Diversity_Dataset_Bp_LPS_timecourse_24_0_hrLymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Lipopolysaccharide (LPS) stimulated immune cells (Stimulated PBMC)
Cuadras02_Control_2_mockc_16h_vs_mocka_16h
Garber01_315_99_SCLCCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Small cell lung cancer (Lung cancer)
Golub99_ALL 1101 TA- ML NorelAcute lymphocytic leukemia (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*)
Golub99_ALL 1245 TA- NorelAcute lymphocytic leukemia (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*)
Golub99_ALL 1305 MLAcute lymphocytic leukemia (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*)
Golub99_ALL 1457 MLAcute lymphocytic leukemia (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*)
Golub99_ALL 23368 TA- NorelAcute lymphocytic leukemia (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*)
Golub99_ALL_11103_B-cellAcute lymphocytic leukemia (Leukemia), B cells (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*)
Golub99_ALL_17638_T-cellAcute lymphocytic leukemia (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*), T cells (Leukemia)
Golub99_ALL_19183_B-cellAcute lymphocytic leukemia (Leukemia), B cells (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*)
Golub99_ALL_19881_T-cellAcute lymphocytic leukemia (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*), T cells (Leukemia)
Golub99_ALL_20185_B-cellAcute lymphocytic leukemia (Leukemia), B cells (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*)
Golub99_ALL_22474_T-cellAcute lymphocytic leukemia (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*), T cells (Leukemia)
Golub99_ALL_28373_B-cellAcute lymphocytic leukemia (Leukemia), B cells (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*)
Golub99_ALL_9723_T-cellAcute lymphocytic leukemia (Leukemia), Lymphocytes (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*), T cells (Leukemia)
Golub99_AML 5 ML RelapAcute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*), Acute myelogeous leukemia (Leukemia)
Iyer99_Serum_0_25Cell line (Fibroblast serum*), Cancer and cell line (Fibroblast serum*), Skin fibroblasts (Fibroblast serum*), Fibroblasts (Fibroblast serum*), Serum response in epithelial cells (Fibroblast serum*)
Ramaswamy01_Normal__Germinal_Center_GC3Hematologic samples (Various tumors), Hematologic samples and cell lines (Various tumors), Normal tissue (Various tumors), Centroblasts (Various tumors), GC B like DLBCL (Various tumors)
Ross00_COLO205_CL4010_COLONColon cancer cell line (NCI60), Fast doubling (20-40) cell lines (NCI60), Colon tissue, cancer or cell line (NCI60), Colon cancer or cell line (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*)
Ross00_HCT_116_CL4003_COLONColon cancer cell line (NCI60), Fast doubling (20-40) cell lines (NCI60), Colon tissue, cancer or cell line (NCI60), Colon cancer or cell line (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*)
Ross00_MALME_3M_CL10002_MELANOMACell line (NCI60*), Cancer and cell line (NCI60*), Melanoma cell line (NCI60), Melanoma tumor or cell line (NCI60)
Ross00_MCF7A_reproFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Breast cancer cell line (NCI60), Female hormonal cancer cell line (NCI60), Breast cancer or cell line (NCI60), Breast tissue, cancer or cell line (NCI60), Female hormonal tissue, cancer or cell line (NCI60)
Ross00_MCF7_CL5001_BREASTFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Breast cancer cell line (NCI60), Female hormonal cancer cell line (NCI60), Breast cancer or cell line (NCI60), Breast tissue, cancer or cell line (NCI60), Female hormonal tissue, cancer or cell line (NCI60)
Ross00_MDA_N_CL5012_BREASTFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Breast cancer cell line (NCI60), Female hormonal cancer cell line (NCI60), Breast cancer or cell line (NCI60), Breast tissue, cancer or cell line (NCI60), Female hormonal tissue, cancer or cell line (NCI60)
Ross00_MOLT_4_CL7006_LEUKEMIAFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Leukemia cell line (NCI60), Hematologic samples and cell lines (NCI60), Hematologic cancer and cell line (NCI60)
Ross00_NCI_H522_CL1003_NSCLCFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*)
Ross00_OVCAR_5_CL6003_OVARIANCell line (NCI60*), Cancer and cell line (NCI60*), Female hormonal cancer cell line (NCI60), Female hormonal tissue, cancer or cell line (NCI60)
Ross00_SK_MEL_5_CL10007_MELANOMAFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Melanoma cell line (NCI60), Melanoma tumor or cell line (NCI60)
Ross00_SR_CL7019_LEUKEMIAFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Leukemia cell line (NCI60), Hematologic samples and cell lines (NCI60), Hematologic cancer and cell line (NCI60)
Ross00_SW_620_CL4009_COLONColon cancer cell line (NCI60), Fast doubling (20-40) cell lines (NCI60), Colon tissue, cancer or cell line (NCI60), Colon cancer or cell line (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*)
Singh02_T04__tumorProstate (Prostate cancer*), Prostate cancer (Prostate cancer), Prostate cancer or cell line (Prostate cancer), Cancer and cell line (Prostate cancer), Cancer (Prostate cancer), Adenocarcinoma (Prostate cancer)
Staunton01_BREAST_MCF7Fast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Breast cancer cell line (NCI60), Female hormonal cancer cell line (NCI60), Breast cancer or cell line (NCI60), Breast tissue, cancer or cell line (NCI60), Female hormonal tissue, cancer or cell line (NCI60), Epithelial cell line (NCI60)
Staunton01_BREAST_MDNFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Breast cancer cell line (NCI60), Female hormonal cancer cell line (NCI60), Breast cancer or cell line (NCI60), Breast tissue, cancer or cell line (NCI60), Female hormonal tissue, cancer or cell line (NCI60), Epithelial cell line (NCI60)
Staunton01_COLON_COLO205Colon cancer cell line (NCI60), Fast doubling (20-40) cell lines (NCI60), Colon tissue, cancer or cell line (NCI60), Colon cancer or cell line (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Epithelial cell line (NCI60)
Staunton01_COLON_HCT15Colon cancer cell line (NCI60), Fast doubling (20-40) cell lines (NCI60), Colon tissue, cancer or cell line (NCI60), Colon cancer or cell line (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Epithelial cell line (NCI60)
Staunton01_LEUK_CCRFCEMFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Leukemia cell line (NCI60), Hematologic samples and cell lines (NCI60), Hematologic cancer and cell line (NCI60)
Staunton01_LEUK_MOLT4Fast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Leukemia cell line (NCI60), Hematologic samples and cell lines (NCI60), Hematologic cancer and cell line (NCI60)
Staunton01_MELAN_M14Fast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Melanoma cell line (NCI60), Melanoma tumor or cell line (NCI60)
Staunton01_MELAN_MALME3MCell line (NCI60*), Cancer and cell line (NCI60*), Melanoma cell line (NCI60), Melanoma tumor or cell line (NCI60)
Staunton01_MELAN_SKMEL28Fast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Melanoma cell line (NCI60), Melanoma tumor or cell line (NCI60)
Staunton01_NSCLC_NCIH522Fast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Epithelial cell line (NCI60)
Staunton01_PROSTATE_DU145Fast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Epithelial cell line (NCI60)