Repressed experiments for module 308

Experiment nameClinical attributes
Alizadeh00_Blood_B_cells_anti_IgM_24h_lc8n057Hematologic samples and cell lines (B lymphoma), Lymphocytes (B lymphoma*), Normal lymphocytes (B lymphoma), B cells (B lymphoma*), Hematologic samples (B lymphoma), Stimulated B cells (B lymphoma)
Alizadeh00_Blood_B_cells_anti_IgM_6hHematologic samples and cell lines (B lymphoma), Lymphocytes (B lymphoma*), Normal lymphocytes (B lymphoma), B cells (B lymphoma*), Hematologic samples (B lymphoma), Stimulated B cells (B lymphoma)
Alizadeh00_Blood_B_cells_anti_IgM_CD40L_IL_4_24hHematologic samples and cell lines (B lymphoma), Lymphocytes (B lymphoma*), Normal lymphocytes (B lymphoma), B cells (B lymphoma*), Hematologic samples (B lymphoma), Stimulated B cells (B lymphoma)
Alizadeh00_Blood_B_cells_anti_IgM_CD40L_IL_4_6hHematologic samples and cell lines (B lymphoma), Lymphocytes (B lymphoma*), Normal lymphocytes (B lymphoma), B cells (B lymphoma*), Hematologic samples (B lymphoma), Stimulated B cells (B lymphoma)
Alizadeh00_Blood_B_cells_anti_IgM_IL_4_6hHematologic samples and cell lines (B lymphoma), Lymphocytes (B lymphoma*), Normal lymphocytes (B lymphoma), B cells (B lymphoma*), Hematologic samples (B lymphoma), Stimulated B cells (B lymphoma)
Alizadeh00_Blood_T_cells_Adult_Naive_CD4_I_P_StimulatedHematologic samples and cell lines (B lymphoma), Lymphocytes (B lymphoma*), Normal lymphocytes (B lymphoma), T cells (B lymphoma), Hematologic samples (B lymphoma)
Alizadeh00_CLL_44_Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Alizadeh00_CLL_51_lc8n119Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Alizadeh00_CLL_65_Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Alizadeh00_CLL_71Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Alizadeh00_DLCL_0005_lc4b064Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Diffuse large B cell lymphoma - DLBCL (B lymphoma), Activated B like DLBCL (B lymphoma)
Alizadeh00_DLCL_0026Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Diffuse large B cell lymphoma - DLBCL (B lymphoma), GC B like DLBCL (B lymphoma)
Alizadeh00_DLCL_0029Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Diffuse large B cell lymphoma - DLBCL (B lymphoma), GC B like DLBCL (B lymphoma)
Blader01_HFF_infected_with_PDS_tachyzoites_24_hourFibroblasts (Fibroblast infection*), Skin fibroblasts (Fibroblast infection*), Toxoplasma infected skin fibroblasts (Fibroblast infection*)
Boldrick02_Diversity_Dataset_Ionomycin_PMA_timecourse_6_0_hrLymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Ionomycin PMA stimulated immune cells (Stimulated PBMC)
Boldrick02_Dose_Response_Dataset_Bp338_1000X_dose_timecourse_12_0hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), B. petrussis 338 stimulated immune cells (Stimulated PBMC), Lymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), 1000X dose immune stimulation (Stimulated PBMC)
Boldrick02_Dose_Response_Dataset_Bp338_10X_dose_timecourse_2_0hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), B. petrussis 338 stimulated immune cells (Stimulated PBMC), Lymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*)
Boldrick02_Dose_Response_Dataset_Bp338_10X_dose_timecourse_6_0hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), B. petrussis 338 stimulated immune cells (Stimulated PBMC), Lymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*)
Chen02_Liver_HBV_HK67Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Detweiler01_E3_U937_mock_0_5hbMacrophages (Stimulated immune*), Monocytes (Stimulated immune*), Hematologic samples and cell lines (Stimulated immune*), Hematologic cancer and cell line (Stimulated immune*)
Garber01_199_97_Adeno_cCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*)
Garber01_219_97_normalLung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Lessnick02_Run 1, Day 4Cell line (Fibroblast EWS-FLI*), Fibroblasts (Fibroblast EWS-FLI*), Cancer and cell line (Fibroblast EWS-FLI*), EWS/FLI expressing fibroblasts (Fibroblast EWS-FLI*), Skin fibroblasts (Fibroblast EWS-FLI*)
Lessnick02_Run 2, Day 3Cell line (Fibroblast EWS-FLI*), Fibroblasts (Fibroblast EWS-FLI*), Cancer and cell line (Fibroblast EWS-FLI*), EWS/FLI expressing fibroblasts (Fibroblast EWS-FLI*), Skin fibroblasts (Fibroblast EWS-FLI*)
Nutt03_Brain_NO_14Cancer (Gliomas*), CNS tumor (Gliomas*), Cancer and cell line (Gliomas*), CNS tissue, cancer or cell line (Gliomas*), CNS cancer or cell line (Gliomas*), Alive prognosis (Gliomas), Non-classic anaplastic oligodendroglioma (Gliomas)
Perou99_HMEC_X_HMEC_EGF_for_2daysEpithelial cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Human mammary epithelial cells - HMECs (Breast cancer), Human mammary epithelial cells (HMECs) or normal breast tissue (Breast cancer), Normal female hormonal tissue and cells (Breast cancer)
Ramaswamy01_Normal__Breast_BR_1Female hormonal tissue or cancer (Various tumors), Breast tissue, cancer or cell line (Various tumors), Breast tissue or cancer (Various tumors), Female hormonal tissue, cancer or cell line (Various tumors), Normal tissue (Various tumors), Normal breast tissue (Various tumors), Human mammary epithelial cells (HMECs) or normal breast tissue (Various tumors), Normal female hormonal tissue (Various tumors), Normal female hormonal tissue and cells (Various tumors)
Ramaswamy01_Normal__Cerebellum_Brain_Ncer_S-125CNS tissue, cancer or cell line (Various tumors), Normal tissue (Various tumors), Normal CNS tissue (Various tumors), Normal cerebellum tissue (Various tumors)
Ramaswamy01_Normal__Colon_CR_10Normal tissue (Various tumors)
Ramaswamy01_Normal__Colon_CR_3Normal tissue (Various tumors)
Ramaswamy01_Normal__Colon_CR_5Normal tissue (Various tumors)
Ramaswamy01_Normal__Kidney_KT_1Renal tissue (Various tumors), Normal tissue (Various tumors)
Ramaswamy01_Normal__Kidney_KT_3Renal tissue (Various tumors), Normal tissue (Various tumors)
Ramaswamy01_Normal__Prostate_95_I_255Prostate (Various tumors), Normal tissue (Various tumors), Normal prostate tissue (Various tumors)
Ramaswamy01_Normal__Prostate_PR_2Prostate (Various tumors), Normal tissue (Various tumors), Normal prostate tissue (Various tumors)
Ramaswamy01_Tumor__Colorectal_Adeno_HCTN_CRT1_ 18851_A1B Cancer (Various tumors), Adenocarcinoma (Various tumors), Cancer and cell line (Various tumors), Cancer (Various tumors*), Cancer and cell line (Various tumors*), Normal colorectal tissue (Various tumors)
Ramaswamy01_Tumor__Renal_Carcinoma_6775Cancer (Various tumors), Cancer and cell line (Various tumors), Cancer (Various tumors*), Cancer and cell line (Various tumors*), Uterine tissue or cancer (Various tumors), Renal tissue (Various tumors)
Ramaswamy01_Tumor__Renal_Carcinoma_Carc_614TSCancer (Various tumors), Cancer and cell line (Various tumors), Cancer (Various tumors*), Cancer and cell line (Various tumors*), Uterine tissue or cancer (Various tumors), Renal tissue (Various tumors)
Ramaswamy01_Tumor__Renal_Carcinoma_Carc_623TOCancer (Various tumors), Cancer and cell line (Various tumors), Cancer (Various tumors*), Cancer and cell line (Various tumors*), Uterine tissue or cancer (Various tumors), Renal tissue (Various tumors)
Ramaswamy01_Tumor__Renal_Carcinoma_Carc_623TSCancer (Various tumors), Cancer and cell line (Various tumors), Cancer (Various tumors*), Cancer and cell line (Various tumors*), Uterine tissue or cancer (Various tumors), Renal tissue (Various tumors)
Rosenwald01_CLL_19Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Rosenwald01_CLL_21Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Rosenwald01_CLL_51Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Rosenwald01_CLL_59Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Rosenwald01_CLL_60Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Rosenwald01_CLL_66_SL106Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Rosenwald01_CLL_67Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Rosenwald01_CLL_69Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Chronic lymphocytic leukemia (B lymphoma), Leukemia (B lymphoma), Leukemia or leukemia cell line (B lymphoma)
Ross00_Normal_BreastCancer and cell line (NCI60*), Breast tissue, cancer or cell line (NCI60), Female hormonal tissue, cancer or cell line (NCI60), Breast tissue or cancer (NCI60), Female hormonal tissue or cancer (NCI60)
Ross01_HMS32Cell line (NCI60*), Cancer and cell line (NCI60*), Breast cancer cell line (NCI60), Female hormonal cancer cell line (NCI60), Breast cancer or cell line (NCI60), Breast tissue, cancer or cell line (NCI60), Female hormonal tissue, cancer or cell line (NCI60)
Sorlie01_BC106B_BEBreast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Adenocarcinoma (Breast cancer*), Breast cancer (Breast cancer*), Cancer (Breast cancer*), Breast tissue or cancer (Breast cancer*), Female hormonal cancer (Breast cancer*), Female hormonal tissue or cancer (Breast cancer*), Estogen receptor (ER) positive breast cancer (Breast cancer), Wild type p53 tumor (Breast cancer), Dead prognosis (Breast cancer), Grade 1 (Breast cancer)
Staunton01_BREAST_BT549Cell line (NCI60*), Cancer and cell line (NCI60*), Breast cancer cell line (NCI60), Female hormonal cancer cell line (NCI60), Breast cancer or cell line (NCI60), Breast tissue, cancer or cell line (NCI60), Female hormonal tissue, cancer or cell line (NCI60), Epithelial cell line (NCI60)