Induced experiments for module 543

Experiment nameClinical attributes
Armstrong01_AML_14Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*), Acute myelogeous leukemia (Leukemia)
Bhattacharjee01_NL-1179-A408-7Lung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Bhattacharjee01_NL-1884-A411-7Lung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Bhattacharjee01_NL-2562-A413-7Lung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Bhattacharjee01_NL-279n1-A98-3Lung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Bhattacharjee01_NL-3104-A331-6Lung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Bhattacharjee01_NL-4353-A334-6Lung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Bhattacharjee01_NL-6853-A336-6Lung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Bhattacharjee01_NL-7530-A338-6Lung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Boldrick02_Diversity_Dataset_Bp338_timecourse_2_0_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), B. petrussis 338 stimulated immune cells (Stimulated PBMC), Lymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*)
Boldrick02_Diversity_Dataset_Bp338_timecourse_6_0_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), B. petrussis 338 stimulated immune cells (Stimulated PBMC), Lymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*)
Boldrick02_Diversity_Dataset_Bp_Minnesota1_timecourse_0_0_hrLymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Unstimulated immune cells (Stimulated PBMC)
Boldrick02_Diversity_Dataset_Bp_Minnesota1_timecourse_4_0_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), Lymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), B. petrussis Minnesota 1 stimulated immune cells (Stimulated PBMC)
Boldrick02_Diversity_Dataset_S_aureus1_timecourse_4_0_hrLymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), S. aureus stimulated immune cells (Stimulated PBMC)
Boldrick02_Diversity_Dataset_S_aureus1_timecourse_6_0_hrLymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), S. aureus stimulated immune cells (Stimulated PBMC)
Boldrick02_Diversity_Dataset_S_aureus2_timecourse_24_0_hrLymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), S. aureus stimulated immune cells (Stimulated PBMC)
Boldrick02_Diversity_Dataset_S_aureus2_timecourse_2_0_hrLymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), S. aureus stimulated immune cells (Stimulated PBMC)
Boldrick02_Dose_Response_Dataset_Bp_LPS_1_0ug_ml_timecourse_2_0hrLymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Lipopolysaccharide (LPS) stimulated immune cells (Stimulated PBMC)
Boldrick02_Pint_PBMC_E_coli2_timecourse_2_0hrGram negative bacteria stimulated immune cells (Stimulated PBMC), Lymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), E. coli stimulated immune cells (Stimulated PBMC)
Chen02_HCC_HBV_HK18Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*)
Chen02_HCC_HBV_HK21Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Invasive liver tumor (Liver cancer)
Chen02_HCC_HBV_HK27Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), p53 positive hepatocellular carcinoma (Liver cancer), Invasive liver tumor (Liver cancer)
Chen02_HCC_HBV_HK50Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*)
Chen02_HCC_HBV_HK58Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), p53 positive hepatocellular carcinoma (Liver cancer), Invasive liver tumor (Liver cancer)
Chen02_HCC_HBV_HK64_T7Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*)
Chen02_HCC_HBV_HK84Hepatocellular carcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), p53 positive hepatocellular carcinoma (Liver cancer)
Chen02_HCC_HBV_SF27Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*)
Chen02_HCC_HBV_SF35_1Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Invasive liver tumor (Liver cancer)
Chen02_HCC_SF4Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*)
Chen02_Liver_HBV_HK10Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), Non-tumor liver tissue (Liver cancer)
Detweiler01_E2_U937_wild_type_2hMacrophages (Stimulated immune*), Monocytes (Stimulated immune*), Hematologic samples and cell lines (Stimulated immune*), Hematologic cancer and cell line (Stimulated immune*)
Garber01_187_96_AdenoCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Stage T1 (Lung cancer)
Garber01_198_96_AdenoCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Stage T1 (Lung cancer)
Garber01_314_99_normalLung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Garber01_315_99_normalLung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Golub99_AML 11 ML Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*), Acute myelogeous leukemia (Leukemia)
Golub99_AML 15 PK NorelAcute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*), Acute myelogeous leukemia (Leukemia)
Nutt03_Brain_CG_3Classical malignant glioblastoma (Gliomas), Cancer (Gliomas*), CNS tumor (Gliomas*), Cancer and cell line (Gliomas*), CNS tissue, cancer or cell line (Gliomas*), CNS cancer or cell line (Gliomas*)
Nutt03_Brain_CG_8Classical malignant glioblastoma (Gliomas), Cancer (Gliomas*), CNS tumor (Gliomas*), Cancer and cell line (Gliomas*), CNS tissue, cancer or cell line (Gliomas*), CNS cancer or cell line (Gliomas*)
Nutt03_Brain_NG_5Cancer (Gliomas*), CNS tumor (Gliomas*), Cancer and cell line (Gliomas*), CNS tissue, cancer or cell line (Gliomas*), CNS cancer or cell line (Gliomas*), Non-classic malignant glioblastoma (Gliomas)
Nutt03_Brain_NO_14Cancer (Gliomas*), CNS tumor (Gliomas*), Cancer and cell line (Gliomas*), CNS tissue, cancer or cell line (Gliomas*), CNS cancer or cell line (Gliomas*), Alive prognosis (Gliomas), Non-classic anaplastic oligodendroglioma (Gliomas)
Perou00_BC208B_AFBreast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), After doxorubicin chemotherapy (Breast cancer), Adenocarcinoma (Breast cancer*), Breast cancer (Breast cancer*), Cancer (Breast cancer*), Breast tissue or cancer (Breast cancer*), Female hormonal cancer (Breast cancer*), Female hormonal tissue or cancer (Breast cancer*)
Perou00_BC402B_AFBreast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), After doxorubicin chemotherapy (Breast cancer), Adenocarcinoma (Breast cancer*), Breast cancer (Breast cancer*), Cancer (Breast cancer*), Breast tissue or cancer (Breast cancer*), Female hormonal cancer (Breast cancer*), Female hormonal tissue or cancer (Breast cancer*)
Perou00_BC709A_AFBreast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), After doxorubicin chemotherapy (Breast cancer), Adenocarcinoma (Breast cancer*), Breast cancer (Breast cancer*), Cancer (Breast cancer*), Breast tissue or cancer (Breast cancer*), Female hormonal cancer (Breast cancer*), Female hormonal tissue or cancer (Breast cancer*)
Perou00_HMEC_CBreast cancer cell line (Breast cancer), Female hormonal cancer cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Human mammary epithelial cells - HMECs (Breast cancer), Human mammary epithelial cells (HMECs) or normal breast tissue (Breast cancer)
Perou00_HMVECBreast cancer cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*)
Pomeroy02_Brain_MGlio_7Cancer (Neuro tumors*), CNS tumor (Neuro tumors*), Cancer and cell line (Neuro tumors*), CNS tissue, cancer or cell line (Neuro tumors*), CNS cancer or cell line (Neuro tumors*), Malignant glioblastoma (Neuro tumors)
Pomeroy02_Brain_MGlio_8Cancer (Neuro tumors*), CNS tumor (Neuro tumors*), Cancer and cell line (Neuro tumors*), CNS tissue, cancer or cell line (Neuro tumors*), CNS cancer or cell line (Neuro tumors*), Malignant glioblastoma (Neuro tumors)
Pomeroy02_Brain_Rhab_6Cancer (Neuro tumors*), Cancer and cell line (Neuro tumors*), Atypical teratoid/rhabdoid tumour - CNS and other origin (Neuro tumors), Renal tissue (Neuro tumors), Renal cancer or cell line (Neuro tumors)
Ross00_A498_CL9013_RENALCell line (NCI60*), Cancer and cell line (NCI60*), Renal cancer cell line (NCI60), Renal cancer or cell line (NCI60), Renal tissue (NCI60), Slow doubling (60-80) cell lines (NCI60)
Ross00_HCC_2998_CL4002_COLONColon cancer cell line (NCI60), Fast doubling (20-40) cell lines (NCI60), Colon tissue, cancer or cell line (NCI60), Colon cancer or cell line (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*)
Ross00_HOP_62_CL1026_NSCLCFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*)
Ross00_M_14_CL10014_MELANOMAFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Melanoma cell line (NCI60), Melanoma tumor or cell line (NCI60)
Ross00_NCI_H226_CL1013_NSCLCCell line (NCI60*), Cancer and cell line (NCI60*), Slow doubling (60-80) cell lines (NCI60)
Ross00_NCI_H23_CL1001_NSCLCFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*)
Ross00_NCI_H322_CL1017_NSCLCFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*)
Singh02_N14__normalNormal prostate tissue (Prostate cancer), Normal tissue (Prostate cancer), Prostate (Prostate cancer*)
Singh02_N24__normalNormal prostate tissue (Prostate cancer), Normal tissue (Prostate cancer), Prostate (Prostate cancer*)
Singh02_N31__normalNormal prostate tissue (Prostate cancer), Normal tissue (Prostate cancer), Prostate (Prostate cancer*)
Singh02_T04__tumorProstate (Prostate cancer*), Prostate cancer (Prostate cancer), Prostate cancer or cell line (Prostate cancer), Cancer and cell line (Prostate cancer), Cancer (Prostate cancer), Adenocarcinoma (Prostate cancer)
Sorlie01_BC402B_BEBreast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Adenocarcinoma (Breast cancer*), Breast cancer (Breast cancer*), Cancer (Breast cancer*), Breast tissue or cancer (Breast cancer*), Female hormonal cancer (Breast cancer*), Female hormonal tissue or cancer (Breast cancer*), Estogen receptor (ER) positive breast cancer (Breast cancer), Wild type p53 tumor (Breast cancer), Grade 3 (Breast cancer)
Staunton01_NSCLC_A549ATCCFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Epithelial cell line (NCI60)