Induced experiments for module 21

Experiment nameClinical attributes
Alizadeh00_Blood_B_cells_anti_IgM_24h_lc8n057Hematologic samples and cell lines (B lymphoma), Lymphocytes (B lymphoma*), Normal lymphocytes (B lymphoma), B cells (B lymphoma*), Hematologic samples (B lymphoma), Stimulated B cells (B lymphoma)
Alizadeh00_Blood_B_cells_anti_IgM_CD40L_24hHematologic samples and cell lines (B lymphoma), Lymphocytes (B lymphoma*), Normal lymphocytes (B lymphoma), B cells (B lymphoma*), Hematologic samples (B lymphoma), Stimulated B cells (B lymphoma)
Alizadeh00_Blood_B_cells_anti_IgM_CD40L_6hHematologic samples and cell lines (B lymphoma), Lymphocytes (B lymphoma*), Normal lymphocytes (B lymphoma), B cells (B lymphoma*), Hematologic samples (B lymphoma), Stimulated B cells (B lymphoma)
Alizadeh00_DLCL_0003Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Diffuse large B cell lymphoma - DLBCL (B lymphoma), GC B like DLBCL (B lymphoma)
Alizadeh00_DLCL_0021Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Diffuse large B cell lymphoma - DLBCL (B lymphoma), Activated B like DLBCL (B lymphoma)
Alizadeh00_OCI_Ly12Cell line (B lymphoma), Hematologic samples and cell lines (B lymphoma), Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), Primary blood mononuclear cells (B lymphoma), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma)
Alizadeh00_OCI_Ly3Cell line (B lymphoma), Hematologic samples and cell lines (B lymphoma), Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), Primary blood mononuclear cells (B lymphoma), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma)
Alizadeh00_U937Cell line (B lymphoma), Hematologic samples and cell lines (B lymphoma), Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), Primary blood mononuclear cells (B lymphoma)
Armstrong01_MLL_13Acute lymphocytic leukemia (Leukemia), B cells (Leukemia), Lymphocytes (Leukemia), Acute lymphocytic leukemia - MLL sub class (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*), Primary blood mononuclear cells (Leukemia)
Armstrong01_MLL__1Acute lymphocytic leukemia (Leukemia), B cells (Leukemia), Bone marrow (Leukemia), Lymphocytes (Leukemia), Acute lymphocytic leukemia - MLL sub class (Leukemia), Acute leukemia (Leukemia*), Hematologic cancer (Leukemia*), Cancer (Leukemia*), Leukemia (Leukemia*), Monocytes (Leukemia*), Hematologic samples and cell lines (Leukemia*), Hematologic cancer and cell line (Leukemia*), Cancer and cell line (Leukemia*), Leukemia or leukemia cell line (Leukemia*)
Bhattacharjee01_AD-131T1-A15-A200-1*Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Stage T1 (Lung cancer)
Bhattacharjee01_AD-275t1-A95-3Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Stage T1 (Lung cancer)
Bhattacharjee01_AD-287t1-A101-3Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Stage T1 (Lung cancer)
Bhattacharjee01_AD-296t21-A106-03 *Stage T2 (Lung cancer), Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*)
Bhattacharjee01_AD-382t1-A117-3 *Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Stage T1 (Lung cancer)
Bhattacharjee01_SQ-2921-A322-5Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Squamous cell lung cancer (Lung cancer)
Bhattacharjee01_SQ-5897-A328-5Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Squamous cell lung cancer (Lung cancer)
Bhattacharjee01_SQ-6147-A329-5Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Squamous cell lung cancer (Lung cancer)
Bhattacharjee01_SQ-SQ6t1-A360-6Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Stage T1 (Lung cancer), Squamous cell lung cancer (Lung cancer)
Boldrick02_Diversity_Dataset_Ionomycin_PMA_timecourse_12_0_hrLymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Ionomycin PMA stimulated immune cells (Stimulated PBMC)
Boldrick02_Diversity_Dataset_Ionomycin_PMA_timecourse_24_0_hrLymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Ionomycin PMA stimulated immune cells (Stimulated PBMC)
Boldrick02_U937_Dataset_Bp338_timecourse_0_0_hrMonocytes (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Unstimulated immune cells (Stimulated PBMC), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC)
Boldrick02_U937_Dataset_Bp338_timecourse_1_0_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), B. petrussis 338 stimulated immune cells (Stimulated PBMC), Monocytes (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC)
Boldrick02_U937_Dataset_Bp338_timecourse_2_0_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), B. petrussis 338 stimulated immune cells (Stimulated PBMC), Monocytes (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC)
Boldrick02_U937_Dataset_BpA2_6_timecourse_0_5_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), Monocytes (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), 0.5hr immune stimulation (Stimulated PBMC), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC), B. petrussis A2 stimulated immune cells (Stimulated PBMC)
Boldrick02_U937_Dataset_BpA2_6_timecourse_1_0_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), Monocytes (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC), B. petrussis A2 stimulated immune cells (Stimulated PBMC)
Boldrick02_U937_Dataset_BpA2_6_timecourse_2_0_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), Monocytes (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC), B. petrussis A2 stimulated immune cells (Stimulated PBMC)
Boldrick02_U937_Dataset_BpTox6_timecourse_0_5_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), Monocytes (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), 0.5hr immune stimulation (Stimulated PBMC), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC), B. petrussis Tox 6 stimulated immune cells (Stimulated PBMC)
Boldrick02_U937_Dataset_BpTox6_timecourse_0_hrMonocytes (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Unstimulated immune cells (Stimulated PBMC), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC)
Boldrick02_U937_Dataset_Uninfected_timecourse_0_0_hrMonocytes (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Unstimulated immune cells (Stimulated PBMC), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC)
Boldrick02_U937_Dataset_Uninfected_timecourse_0_5_hrMonocytes (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), S. aureus stimulated immune cells (Stimulated PBMC), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC)
Boldrick02_U937_Dataset_Uninfected_timecourse_1_0_hrMonocytes (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Unstimulated immune cells (Stimulated PBMC), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC)
Boldrick02_U937_Dataset_Uninfected_timecourse_2_0_hrMonocytes (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Unstimulated immune cells (Stimulated PBMC), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC)
Boldrick02_U937_Dataset_Uninfected_timecourse_4_0_hrMonocytes (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Unstimulated immune cells (Stimulated PBMC), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC)
Boldrick02_U937_Dataset_Uninfected_timecourse_6_0_hrMonocytes (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Unstimulated immune cells (Stimulated PBMC), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC)
Chen02_HCC_HBV_HK37Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*), p53 positive hepatocellular carcinoma (Liver cancer), Invasive liver tumor (Liver cancer)
Chen02_SK_HEP_1_cellsCancer and cell line (Liver cancer), Liver tissue, cancer or cell line (Liver cancer*), Cell line (Liver cancer), Liver cancer cell line (Liver cancer)
Chen02_SNU398_cellsCancer and cell line (Liver cancer), Liver tissue, cancer or cell line (Liver cancer*), Cell line (Liver cancer), Liver cancer cell line (Liver cancer)
Detweiler01_E6_U937_wild_type_2hbMacrophages (Stimulated immune*), Monocytes (Stimulated immune*), Hematologic samples and cell lines (Stimulated immune*), Hematologic cancer and cell line (Stimulated immune*)
Garber01_161_96_AdenoCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*)
Garber01_245_97_nodeCancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Squamous cell lung cancer (Lung cancer), Node in lung (Lung cancer)
Nutt03_Brain_CO_6Cancer (Gliomas*), CNS tumor (Gliomas*), Cancer and cell line (Gliomas*), CNS tissue, cancer or cell line (Gliomas*), CNS cancer or cell line (Gliomas*), Alive prognosis (Gliomas)
Perou00_MCF7_NCIBreast cancer cell line (Breast cancer), Epithelial cell line (Breast cancer), Female hormonal cancer cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*)
Perou00_RPMI_8226Cell line (Breast cancer), Cancer and cell line (Breast cancer*)
Perou00_SK_BR_3Breast cancer cell line (Breast cancer), Epithelial cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*)
Pomeroy02_Brain_Rhab_4Cancer (Neuro tumors*), CNS tumor (Neuro tumors*), Cancer and cell line (Neuro tumors*), CNS tissue, cancer or cell line (Neuro tumors*), CNS cancer or cell line (Neuro tumors*), Atypical teratoid/rhabdoid tumour - CNS and other origin (Neuro tumors)
Ramaswamy01_Tumor__Colorectal_Adeno_95_I_057Cancer (Various tumors), Adenocarcinoma (Various tumors), Cancer and cell line (Various tumors), Cancer (Various tumors*), Cancer and cell line (Various tumors*), Normal colorectal tissue (Various tumors)
Ramaswamy01_Tumor__Lymphoma_Large_B-Cell_L_B_CELL_S94_22323_GCancer (Various tumors), Cancer and cell line (Various tumors), Cancer (Various tumors*), Cancer and cell line (Various tumors*), Hematologic cancer (Various tumors), B cells (Various tumors), Lymphoma (Various tumors), Lymphocytes (Various tumors), Primary blood mononuclear cells (Various tumors), Monocytes (Various tumors), Hematologic samples (Various tumors), Hematologic samples and cell lines (Various tumors), Hematologic cancer and cell line (Various tumors), Diffuse large B cell lymphoma - DLBCL (Various tumors), Diffuse large B cell lymphoma tumor or cell line (Various tumors)
Shipp02_DLBC16Hematologic samples and cell lines (B lymphoma), Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Diffuse large B cell lymphoma - DLBCL (B lymphoma), Lymphoma (B lymphoma)
Shipp02_DLBC18Hematologic samples and cell lines (B lymphoma), Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Diffuse large B cell lymphoma - DLBCL (B lymphoma), Lymphoma (B lymphoma)
Shipp02_DLBC31Hematologic samples and cell lines (B lymphoma), Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Diffuse large B cell lymphoma - DLBCL (B lymphoma), Lymphoma (B lymphoma)
Shipp02_DLBC38Hematologic samples and cell lines (B lymphoma), Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Diffuse large B cell lymphoma - DLBCL (B lymphoma), Lymphoma (B lymphoma)
Shipp02_DLBC48Hematologic samples and cell lines (B lymphoma), Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma), Hematologic cancer (B lymphoma*), Cancer (B lymphoma*), Diffuse large B cell lymphoma - DLBCL (B lymphoma), Lymphoma (B lymphoma)
Singh02_T10__tumorProstate (Prostate cancer*), Prostate cancer (Prostate cancer), Prostate cancer or cell line (Prostate cancer), Cancer and cell line (Prostate cancer), Cancer (Prostate cancer), Adenocarcinoma (Prostate cancer)
Singh02_T26__tumorProstate (Prostate cancer*), Prostate cancer (Prostate cancer), Prostate cancer or cell line (Prostate cancer), Cancer and cell line (Prostate cancer), Cancer (Prostate cancer), Adenocarcinoma (Prostate cancer)
Singh02_T47__tumorProstate (Prostate cancer*), Prostate cancer (Prostate cancer), Prostate cancer or cell line (Prostate cancer), Cancer and cell line (Prostate cancer), Cancer (Prostate cancer), Adenocarcinoma (Prostate cancer)
Singh02_T53__tumorProstate (Prostate cancer*), Prostate cancer (Prostate cancer), Prostate cancer or cell line (Prostate cancer), Cancer and cell line (Prostate cancer), Cancer (Prostate cancer), Adenocarcinoma (Prostate cancer)
Singh02_T59__tumorProstate (Prostate cancer*), Prostate cancer (Prostate cancer), Prostate cancer or cell line (Prostate cancer), Cancer and cell line (Prostate cancer), Cancer (Prostate cancer), Adenocarcinoma (Prostate cancer)
Staunton01_RENAL_CAKI1Fast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Renal cancer cell line (NCI60), Renal cancer or cell line (NCI60), Renal tissue (NCI60)