Repressed experiments for module 427

Experiment nameClinical attributes
Alizadeh00_OCI_Ly10_lc7b042Cell line (B lymphoma), Hematologic samples and cell lines (B lymphoma), Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma)
Alizadeh00_OCI_Ly12Cell line (B lymphoma), Hematologic samples and cell lines (B lymphoma), Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), Primary blood mononuclear cells (B lymphoma), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma)
Alizadeh00_OCI_Ly3_lc4b041Cell line (B lymphoma), Hematologic samples and cell lines (B lymphoma), Lymphoma or lymphoma cell line (B lymphoma), Lymphocytes (B lymphoma*), Hematologic cancer and cell line (B lymphoma*), Cancer and cell line (B lymphoma*), B cells (B lymphoma*), Diffuse large B cell lymphoma tumor or cell line (B lymphoma)
Bhattacharjee01_AD-213t1-A146-4Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Stage T1 (Lung cancer)
Bhattacharjee01_AD-221t1-A148-4Adenocarcinoma - extrapulmonary metastasis (Lung cancer), Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Stage T1 (Lung cancer)
Bhattacharjee01_AD-268t1 dup b4 -A93-3 **Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Stage T1 (Lung cancer)
Bhattacharjee01_AD-287t1-A101-3Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Stage T1 (Lung cancer)
Bhattacharjee01_AD-375t1-A115-3 *Cancer (Lung cancer*), Cancer and cell line (Lung cancer*), Lung tissue, cancer or cell line (Lung cancer*), Adenocarcinoma (Lung cancer), Lung cancer (Lung cancer*), Non small cell lung cancer (Lung cancer*), Lung cancer or cell line (Lung cancer*), Non small cell lung cancer and cell line (Lung cancer*), Stage T1 (Lung cancer)
Boldrick02_Live_vs_Killed_Dataset_0_0hr_2Lymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Unstimulated immune cells (Stimulated PBMC)
Boldrick02_Live_vs_Killed_Dataset_Bp338_Killed_timecourse_2hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), B. petrussis 338 stimulated immune cells (Stimulated PBMC), Lymphocytes (Stimulated PBMC*), Monocytes (Stimulated PBMC*), Primary blood mononuclear cells (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*)
Boldrick02_U937_Dataset_Bp537_timecourse_1hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), Monocytes (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC), B. petrussis 537 stimulated immune cells (Stimulated PBMC)
Boldrick02_U937_Dataset_BpA2_6_timecourse_0_5_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), Monocytes (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), 0.5hr immune stimulation (Stimulated PBMC), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC), B. petrussis A2 stimulated immune cells (Stimulated PBMC)
Boldrick02_U937_Dataset_BpA2_6_timecourse_1_0_hrB. petrussis stimulated immune cells (Stimulated PBMC), Gram negative bacteria stimulated immune cells (Stimulated PBMC), Monocytes (Stimulated PBMC*), Stimulated immune cells (Stimulated PBMC*), Hematologic samples and cell lines (Stimulated PBMC*), Macrophages (Stimulated PBMC), Hematologic cancer and cell line (Stimulated PBMC), B. petrussis A2 stimulated immune cells (Stimulated PBMC)
Chen02_HCC_HBV_SF27Hepatocellular carcinoma (Liver cancer), Adenocarcinoma (Liver cancer), Cancer and cell line (Liver cancer), Cancer (Liver cancer), Hepatitis infected liver (Liver cancer*), Liver tissue (Liver cancer*), Liver tissue, cancer or cell line (Liver cancer*)
Garber01_222_97_normalLung tissue, cancer or cell line (Lung cancer*), Normal tissue (Lung cancer), Normal lung tissue (Lung cancer)
Nutt03_Brain_NG_6Cancer (Gliomas*), CNS tumor (Gliomas*), Cancer and cell line (Gliomas*), CNS tissue, cancer or cell line (Gliomas*), CNS cancer or cell line (Gliomas*), Non-classic malignant glioblastoma (Gliomas)
Perou00_MCF7_NCIBreast cancer cell line (Breast cancer), Epithelial cell line (Breast cancer), Female hormonal cancer cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*)
Perou99_HMEC_EGF_then_refed_EGF_for_1_5hrsEpithelial cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Human mammary epithelial cells - HMECs (Breast cancer), Human mammary epithelial cells (HMECs) or normal breast tissue (Breast cancer), Normal female hormonal tissue and cells (Breast cancer)
Perou99_HMEC_X_Confluent_HMECEpithelial cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Human mammary epithelial cells - HMECs (Breast cancer), Human mammary epithelial cells (HMECs) or normal breast tissue (Breast cancer), Normal female hormonal tissue and cells (Breast cancer)
Perou99_HMEC_X_HB2_0164Breast cancer cell line (Breast cancer), Epithelial cell line (Breast cancer), Female hormonal cancer cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*)
Perou99_HMEC_X_HMEC_EGF_for_2daysEpithelial cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Human mammary epithelial cells - HMECs (Breast cancer), Human mammary epithelial cells (HMECs) or normal breast tissue (Breast cancer), Normal female hormonal tissue and cells (Breast cancer)
Perou99_HMEC_X_HMEC_Interferon_alpha_24hrsEpithelial cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Human mammary epithelial cells - HMECs (Breast cancer), Human mammary epithelial cells (HMECs) or normal breast tissue (Breast cancer), Normal female hormonal tissue and cells (Breast cancer)
Perou99_HMEC_X_HMEC_TGFbeta_24hrsCell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Human mammary epithelial cells - HMECs (Breast cancer), Human mammary epithelial cells (HMECs) or normal breast tissue (Breast cancer), Normal female hormonal tissue and cells (Breast cancer)
Perou99_HMEC_X_Hs578tBreast cancer cell line (Breast cancer), Epithelial cell line (Breast cancer), Female hormonal cancer cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*)
Perou99_HMEC_X_MCF7_NCIBreast cancer cell line (Breast cancer), Epithelial cell line (Breast cancer), Female hormonal cancer cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*)
Perou99_HMEC_X_MatrigelEpithelial cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Human mammary epithelial cells - HMECs (Breast cancer), Human mammary epithelial cells (HMECs) or normal breast tissue (Breast cancer), Normal female hormonal tissue and cells (Breast cancer)
Perou99_HMEC_X_NB2Breast tissue, cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Breast tissue or cancer (Breast cancer*), Female hormonal tissue or cancer (Breast cancer*), Human mammary epithelial cells (HMECs) or normal breast tissue (Breast cancer), Normal breast tissue (Breast cancer), Normal female hormonal tissue (Breast cancer), Normal female hormonal tissue and cells (Breast cancer), Normal tissue (Breast cancer)
Perou99_HMEC_X_Senescent_HMEC_2Epithelial cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Human mammary epithelial cells - HMECs (Breast cancer), Human mammary epithelial cells (HMECs) or normal breast tissue (Breast cancer), Normal female hormonal tissue and cells (Breast cancer)
Perou99_HMEC_control_X_HMEC_Interferon_gamma_24hrsEpithelial cell line (Breast cancer), Cell line (Breast cancer), Breast tissue, cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Human mammary epithelial cells - HMECs (Breast cancer), Human mammary epithelial cells (HMECs) or normal breast tissue (Breast cancer), Normal female hormonal tissue and cells (Breast cancer)
Pomeroy02_Brain_MGlio_4Cancer (Neuro tumors*), CNS tumor (Neuro tumors*), Cancer and cell line (Neuro tumors*), CNS tissue, cancer or cell line (Neuro tumors*), CNS cancer or cell line (Neuro tumors*), Malignant glioblastoma (Neuro tumors)
Ross00_MALME_3M_CL10002_MELANOMACell line (NCI60*), Cancer and cell line (NCI60*), Melanoma cell line (NCI60), Melanoma tumor or cell line (NCI60)
Ross00_MOLT_4_CL7006_LEUKEMIAFast doubling (20-40) cell lines (NCI60), Cell line (NCI60*), Cancer and cell line (NCI60*), Leukemia cell line (NCI60), Hematologic samples and cell lines (NCI60), Hematologic cancer and cell line (NCI60)
Singh02_N10__normalNormal prostate tissue (Prostate cancer), Normal tissue (Prostate cancer), Prostate (Prostate cancer*)
Sorlie01_BC118B_BEBreast tissue, cancer or cell line (Breast cancer*), Breast cancer or cell line (Breast cancer*), Cancer and cell line (Breast cancer*), Female hormonal cancer or cell line (Breast cancer*), Female hormonal tissue, cancer or cell line (Breast cancer*), Adenocarcinoma (Breast cancer*), Breast cancer (Breast cancer*), Cancer (Breast cancer*), Breast tissue or cancer (Breast cancer*), Female hormonal cancer (Breast cancer*), Female hormonal tissue or cancer (Breast cancer*), Estogen receptor (ER) positive breast cancer (Breast cancer), Wild type p53 tumor (Breast cancer), Dead prognosis (Breast cancer)