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Modules by Regulators Below is a list of all modules by regulators. Regulator Module Description Genes AFR1 43 Unknown genes I 36 ALPHA2 12 Nuclear 47 ALPHA2 12 Nuclear 47 ALPHA2 1 Respiration and carbon regulation 55 APG1 44 Unknown genes II 29 BAS1 5 Glycolysis and Folding 37 BCY1 39 Protein folding 23 BCY1 27 Cell wall and transport I 23 BMH1 5 Glycolysis and Folding 37 BMH1 39 Protein folding 23 BMH2 37 Proteasome and Endocytosis 31 CDC14 20 TFs I 53 CDC14 30 Cell cycle (G2/M) 30 CDC42 38 Protein modification and trafficking 62 CLB1 30 Cell cycle (G2/M) 30 CLB5 31 Cell cycle, TFs and DNA metabolism 71 CMK1 33 Mitochondrial and Signaling 87 CMK1 2 Energy, osmolarity and cAMP signaling 64 CMK1 1 Respiration and carbon regulation 55 CNB1 47 Mixed III 41 CUP9 37 Proteasome and Endocytosis 31 ECM22 5 Glycolysis and Folding 37 FAR1 30 Cell cycle (G2/M) 30 FKH1 48 Mixed IV 35 GAC1 4 Energy and Osmotic stress II 42 GAC1 6 Galactose metabolism 4 GAC1 1 Respiration and carbon regulation 55 GAL4 6 Galactose metabolism 4 GAT1 9 AA metabolism I 39 GAT1 8 Nitrogen catabolite repression 29 GAT1 24 Sporulation and TFs 74 GAT1 11 AA and purine metabolism 53 GCN20 5 Glycolysis and Folding 37 GCN20 36 ER and Nuclear 79 GCN20 24 Sporulation and TFs 74 GCN20 47 Mixed III 41 GCN20 46 Mixed II 52 GCN20 42 Unkown (sub-telomeric) 82 GIS1 33 Mitochondrial and Signaling 87 GIS1 31 Cell cycle, TFs and DNA metabolism 71 GIS1 18 TFs and RNA processing 59 GIS1 17 DNA and RNA processing 77 HAP4 10 AA metabolism II 37 HAP4 1 Respiration and carbon regulation 55 HRT1 37 Proteasome and Endocytosis 31 IME4 16 RNA Processing and Cell Cycle 59 IME4 9 AA metabolism I 39 IME4 37 Proteasome and Endocytosis 31 IME4 32 Cell cycle and general TFs 64 INO2 12 Nuclear 47 KAR4 45 Unknown genes III 39 KIN82 3 Energy and Osmotic stress I 31 KIN82 28 Cell wall and Transport II 63 KIN82 2 Energy, osmolarity and cAMP signaling 64 KRE35 15 mRNA, rRNA and tRNA processing 43 KSP1 20 TFs I 53 MCM1 20 TFs I 53 MET18 19 TFs and nuclear transport 48 MRF1' 35 Trafficking and Mitochondrial 87 MSN4 26 Sporulation and Cell wall 78 MSN4 28 Cell wall and Transport II 63 MSN4 1 Respiration and carbon regulation 55 NOT3 36 ER and Nuclear 79 PLP2 8 Nitrogen catabolite repression 29 PPH3 18 TFs and RNA processing 59 PPH3 13 Mixed I 28 PPT1 16 RNA Processing and Cell Cycle 59 PPT1 14 Ribosomal and phosphate metabolism 32 PPT1 14 Ribosomal and phosphate metabolism 32 PPT1 15 mRNA, rRNA and tRNA processing 43 PPT1 19 TFs and nuclear transport 48 PPT1 2 Energy, osmolarity and cAMP signaling 64 PPT1 43 Unknown genes I 36 PPT1 17 DNA and RNA processing 77 PTC3 38 Protein modification and trafficking 62 PTC3 22 TFs, cell wall and mating 39 RAS2 13 Mixed I 28 RSC3 34 Mitochondrial and Protein fate 37 SDS22 35 Trafficking and Mitochondrial 87 SDS22 34 Mitochondrial and Protein fate 37 SHO1 48 Mixed IV 35 SHP1 27 Cell wall and transport I 23 SIP2 14 Ribosomal and phosphate metabolism 32 SIP2 25 Sporulation and cAMP pathway 59 SIP2 46 Mixed II 52 SKO1 40 Oxidative stress I 15 TOS8 7 Snf kinase regulated processes 74 TOS8 46 Mixed II 52 TOS8 41 Oxidative stress II 15 TPK1 33 Mitochondrial and Signaling 87 TPK1 35 Trafficking and Mitochondrial 87 TPK1 3 Energy and Osmotic stress I 31 TPK1 2 Energy, osmolarity and cAMP signaling 64 TPK1 17 DNA and RNA processing 77 TPK2 16 RNA Processing and Cell Cycle 59 TPK2 15 mRNA, rRNA and tRNA processing 43 TUP1 36 ER and Nuclear 79 UGA3 10 AA metabolism II 37 UME1 32 Cell cycle and general TFs 64 UME1 47 Mixed III 41 USV1 38 Protein modification and trafficking 62 USV1 16 RNA Processing and Cell Cycle 59 USV1 4 Energy and Osmotic stress II 42 USV1 7 Snf kinase regulated processes 74 USV1 39 Protein folding 23 USV1 19 TFs and nuclear transport 48 USV1 26 Sporulation and Cell wall 78 USV1 25 Sporulation and cAMP pathway 59 USV1 29 Cell differentiation 41 USV1 29 Cell differentiation 41 USV1 28 Cell wall and Transport II 63 WSC4 4 Energy and Osmotic stress II 42 XBP1 10 AA metabolism II 37 XBP1 25 Sporulation and cAMP pathway 59 XBP1 32 Cell cycle and general TFs 64 XBP1 3 Energy and Osmotic stress I 31 XBP1 45 Unknown genes III 39 XBP1 1 Respiration and carbon regulation 55 YAP1 40 Oxidative stress I 15 YAP1 40 Oxidative stress I 15 YAP6 4 Energy and Osmotic stress II 42 YAP6 7 Snf kinase regulated processes 74 YAP6 26 Sporulation and Cell wall 78 YER184C 33 Mitochondrial and Signaling 87 YER184C 2 Energy, osmolarity and cAMP signaling 64 YJL103C 36 ER and Nuclear 79 YPK1 29 Cell differentiation 41 YPK1 34 Mitochondrial and Protein fate 37 YPK2 39 Protein folding 23