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Browse by gene sets

Each module was originated from a combination of several gene sets, where the gene sets include: clusters of coherently expressed genes from a variety of studies ('Clusters'), genes expressed in specific tissue types ('Tissue'), and genes belonging to the same functional category ('GO') or pathway ('GenMapp' or 'KEGG'). For each gene set, you can see below all the modules that originated from it, as well as the source of the gene set.

Gene setSourceModules
26S proteasomeGO28 91
3'\,5'-cyclic-nucleotide phosphodiesterase activityTissue560
A2058_1Tissue18 52 118
A2058_2Tissue18 52 118
acetylcholine receptor activityGO216 267 328 415
acid-D-amino acid ligase activityGO233 278
actin bindingGO419 524
actin filament-based movementGO330 387 512
actin filament-based processGO330 387 512
acyl-CoA dehydrogenase activityGO184 221
adenylate cyclase activationGO454 575
Adrenal_gland_1Tissue19
Adrenal_gland_2Tissue19
alcohol dehydrogenase activityGO514
alcohol dehydrogenase activity\, zinc-dependentTissue514
aldehyde dehydrogenase activityGO464
aldehyde metabolismGO519
Alizadeh00 11Clusters238 301 361 436
Alizadeh00 13Clusters237 301 361 436
Alizadeh00 16Clusters97 182 261 358 525
Alizadeh00 18Clusters145 188 238 301 361 436
Alizadeh00 19Clusters169
Alizadeh00 20Clusters54
Alizadeh00 21Clusters495
Alizadeh00 23Clusters255 317 378 459 532
Alizadeh00 25Clusters79 128 170
Alizadeh00 27Clusters301 361 436
Alizadeh00 29Clusters128 170
Alizadeh00 30Clusters317 378 459 532
Alizadeh00 31Clusters429 484
Alizadeh00 33Clusters69 136 179 255 317 378 459 532
Alizadeh00 34Clusters378 459 532
Alizadeh00 36Clusters208 292 345 436
Alizadeh00 3Clusters136 179 255 317 378 459 532
Alizadeh00 40Clusters37 69 136 179 255 317 378 459 532
Alizadeh00 42Clusters61 126
Alizadeh00 43Clusters261 358 525
Alizadeh00 44Clusters534
Alizadeh00 45Clusters430 484
Alizadeh00 46Clusters456
Alizadeh00 48Clusters436
Alizadeh00 4Clusters179 255 317 378 459 532
Alizadeh00 5Clusters292 345 436
Alizadeh00 6Clusters277 358 525
Alizadeh00 8Clusters361 436
Alizadeh00 9Clusters182 261 358 525
alpha-type channel activityGO316 415
amine metabolismGO78
amine oxidase activityGO557
amine receptor activityGO383 441
amino acid activationGO110 160
amino acid and derivative metabolismGO78
amino acid biosynthesisGO354
amino acid metabolismGO235
Aminoacyl-tRNA_biosynthesisKEGG133 160
Amygdala_1Tissue11 66 100 137
Amygdala_2Tissue11 66 100 137
Androgen_and_estrogen_metabolismKEGG505
angiogenesisGO178 362 444 516
anion transportGO141 396 489
anti-apoptosisGO537
antibacterial peptide activityGO423 478
anticoagulant activityGO328 415
antifungal peptide activityGO423 478
antigen bindingGO522
antigen presentation\, endogenous antigenTissue144 293 345 436
antigen presentation\, peptide antigenTissue143 293 345 436
antigen processing\, endogenous antigen via MHC class ITissue144 293 345 436
antigen processing\, exogenous antigen via MHC class IITissue543
antigen processingGO143 293 345 436
antimicrobial peptide activityGO247
apoptosis inhibitor activityGO537
apoptotic programGO528
ApotosisKEGG340
Armstrong01 11Clusters104 181 242 379
Armstrong01 12Clusters13 41 104 181 242 379
Armstrong01 13Clusters94
Armstrong01 21Clusters104 181 242 379
Armstrong01 22Clusters99 129
Armstrong01 25Clusters545
Armstrong01 26Clusters181 242 379
Armstrong01 27Clusters83 114 151
Armstrong01 29Clusters441
Armstrong01 31Clusters54
Armstrong01 32Clusters83 114 151
Armstrong01 34Clusters204
Armstrong01 37Clusters99 129
Armstrong01 38Clusters204
Armstrong01 39Clusters59
Armstrong01 40Clusters204
Armstrong01 42Clusters129
Armstrong01 44Clusters204
Armstrong01 47Clusters533
Armstrong01 48Clusters104 181 242 379
Armstrong01 4Clusters41 104 181 242 379
Armstrong01 5Clusters99 129
Armstrong01 6Clusters99 129
aromatic amino acid family metabolismGO140
ATPase activity\, coupledTissue229 318 403 451
ATP bindingGO244
ATP synthesis coupled electron transport (sensu Eukarya)GO25 77 152
ATP_SynthesisKEGG116 152
Benzoate_degradationKEGG303 403 451
Bhattacharjee01 11Clusters181 242 379
Bhattacharjee01 15Clusters448
Bhattacharjee01 16Clusters99 129
Bhattacharjee01 18Clusters181 242 379
Bhattacharjee01 19Clusters94
Bhattacharjee01 20Clusters83 114 151
Bhattacharjee01 22Clusters47
Bhattacharjee01 23Clusters104 181 242 379
Bhattacharjee01 24Clusters99 129
Bhattacharjee01 25Clusters104 181 242 379
Bhattacharjee01 38Clusters489
Bhattacharjee01 6Clusters99 129
Bhattacharjee01 7Clusters84
biogenic amine metabolismGO440
Blader01 12Clusters323
Blader01 24Clusters495
Blader01 28Clusters495
Blader01 36Clusters495
Blader01 37Clusters495
Blader01 38Clusters495
Blader01 40Clusters458
Blader01 50Clusters151
blood coagulationGO131
blood group antigenGO539
Boldrick02 10Clusters119 171 208 292 345 436
Boldrick02 11Clusters358 525
Boldrick02 12Clusters126
Boldrick02 15Clusters37 69 136 179 255 317 378 459 532
Boldrick02 16Clusters126
Boldrick02 17Clusters179 255 317 378 459 532
Boldrick02 18Clusters171 208 292 345 436
Boldrick02 19Clusters481 544
Boldrick02 20Clusters69 136 179 255 317 378 459 532
Boldrick02 22Clusters308
Boldrick02 26Clusters481 544
Boldrick02 27Clusters136 179 255 317 378 459 532
Boldrick02 28Clusters126
Boldrick02 30Clusters522
Boldrick02 32Clusters308
Boldrick02 34Clusters229 318 403 451
Boldrick02 35Clusters532
Boldrick02 36Clusters119 171 208 292 345 436
Boldrick02 40Clusters465 560
Boldrick02 46Clusters317 378 459 532
Boldrick02 49Clusters261 358 525
Boldrick02 4Clusters171 208 292 345 436
Boldrick02 5Clusters372 441
Boldrick02 8Clusters255 317 378 459 532
Boldrick02 9Clusters119 171 208 292 345 436
bone remodelingGO234
brain developmentGO372 441
Burkitts_Daudi_1Tissue53 118
Burkitts_Daudi_2Tissue53 118
Burkitts_Raji_1Tissue53 118
Burkitts_Raji_2Tissue53 118
calcium-dependent phospholipid bindingGO390 543
calcium ion bindingGO324
calcium ion homeostasisGO262
carbohydrate bindingGO96 410
carbohydrate metabolismGO212
carbohydrate transporter activityGO311 573
carbon-carbon lyase activityGO272 377
Carbon_fixationKEGG377
carbon-oxygen lyase activityGO295 343
carboxylic acid biosynthesisGO327 462
carboxylic acid catabolismGO417
carboxylic acid metabolismGO40
carboxylic acid transporter activityGO71 186 341 411 511
carboxylic acid transportGO71 186 341 411 511
carboxylic ester hydrolase activityGO401
carboxypeptidase A activityGO231 402 492 568
carboxypeptidase activityGO402 492 568
catabolismGO172 209
catalytic activityGO212
cation homeostasisGO191 262
cation transporter activityGO307
cation transportGO498
Caudate_nucleus_1Tissue11 66 100 137
Caudate_nucleus_2Tissue11 66 100 137
cbb3-type cytochrome c oxidaseGO103 152
cell adhesionGO122
cell adhesion molecule activityGO122
cell adhesion receptor activityGO275 412
cell-cell signalingGO92
cell cycle checkpointGO372 441
Cell cycleGenMapp57
Cell_cycleKEGG57
cell deathGO399
cell ion homeostasisGO191 262
cell-matrix adhesionGO412
cell migrationGO411 511
cellular morphogenesisGO524
central nervous system developmentGO497
Cerebellum_1Tissue11 66 100 137
Cerebellum_2Tissue11 66 100 137
cGMP biosynthesisGO445 516
channel/pore class transporter activityGO63
chaperone activityGO299 355
chemokine receptor bindingGO263
chemosensory perceptionGO123 197 252
chemotaxisGO108 263
Chen02 11Clusters458
Chen02 13Clusters205
Chen02 14Clusters67
Chen02 19Clusters239
Chen02 1Clusters257
Chen02 27Clusters451
Chen02 2Clusters493
Chen02 33Clusters49 95 163
Chen02 47Clusters212
Chen02 50Clusters84
Chen02 6Clusters239
Chen02 8Clusters48 95 163
chloride transportGO396 489
Cholesterol BiosynthesisGenMapp432
cholesterol biosynthesisGO432
cholesterol metabolismGO236
chromatin assembly/disassemblyGO189 552
chromatinGO552
chromatin remodeling complexGO450 538
chromosomeGO168 222 421 534
chromosome organization and biogenesis (sensu Eukarya)GO392 457
chymotrypsin activityGO109
Citrate_cycle_TCA_cycleKEGG306
clathrin vesicle coatGO264 395 509
coated vesicleGO39 264 395 509
collagen bindingGO513
collagen catabolismGO211 562
complement activation\, classical pathwayTissue58 130
Complement Activation, Classical PathwayGenMapp130
complement activationGO58 130
complement activityGO130
compound eye morphogenesis (sensu Drosophila)GO80 200 259
condensed chromosomeGO222 421 534
condensed nuclear chromosome kinetochoreGO421 534
conjugation with cellular fusionGO573
conjugation without cellular fusionGO289 375
Corpus_callosum_1Tissue11 66 100 137
Corpus_callosum_2Tissue11 66 100 137
Corpus_callosum_3Tissue11 66 100 137
CortexTissue11 66 100 137
Cuadras02 22Clusters350
Cuadras02 33Clusters363
Cuadras02 35Clusters95 163
Cuadras02 48Clusters372 441
Cuadras02 9Clusters243
cyclic nucleotide biosynthesisGO65 445 516
cyclic nucleotide metabolismGO65 445 516
cysteine metabolismGO428 471 528
Cysteine_metabolismKEGG530
cytochrome c oxidase activityGO103 152
cytochrome P450 activityGO106 135
cytokine activityGO433
cytolysisGO575
Cytoplasmic Ribosomal ProteinsGenMapp83 114 151
Cytoplasmic tRNA SynthetasesGenMapp133 160
cytoskeletal protein bindingGO419 524
cytoskeleton-dependent intracellular transportGO196 253
cytosolic calcium ion concentration elevationGO288 375
cytosolic large ribosomal subunit (sensu Eukarya)GO83 114 151
cytosolic small ribosomal subunit (sensu Eukarya)GO29 83 114 151
damaged DNA bindingGO392 457
defense responseGO223
Detweiler01 13Clusters95 163
Detweiler01 19Clusters372 441
Detweiler01 20Clusters257
Detweiler01 23Clusters9 48 95 163
Detweiler01 24Clusters383 441
Detweiler01 27Clusters342
Detweiler01 29Clusters239
Detweiler01 36Clusters397
Detweiler01 41Clusters205
Detweiler01 49Clusters486
Detweiler01 8Clusters114 151
developmentGO220
DNA bindingGO198 252
DNA dependent ATPase activityGO318 403 451
DNA dependent DNA replicationGO125 158
DNA packagingGO127 189 552
DNA replication and chromosome cycleGO125 158
DNA replicationGO125 158
DOHH2_1Tissue53 118
DOHH2_2Tissue53 118
DRG_1Tissue2
DRG_2Tissue2
ectoderm developmentGO153 297 357
eicosanoid biosynthesisGO148 326 462
eicosanoid metabolismGO148 326 462
Eicosanoid SynthesisGenMapp431
Electron Transport ChainGenMapp62 152
electron transporter activityGO93
electron transportGO43
embryonic developmentGO14 178 362 444 516
embryonic pattern specificationGO14 178 362 444 516
endomembrane systemGO98 198 252
endonuclease activityGO360 439
endopeptidase activityGO209
endopeptidase inhibitor activityGO164
endoribonuclease activityGO467
energy derivation by oxidation of organic compoundsGO306
energy pathwaysGO43
energy taxisGO108 263
enzyme inhibitor activityGO164
ephrin receptor activityGO493
epidermal differentiationGO153 297 357
establishment and/or maintenance of chromatin architectureGO127 189 552
eukaryotic 43S pre-initiation complexGO149
eukaryotic translation initiation factor 3 complexGO447
excitatory extracellular ligand-gated ion channel activityGO267 328 415
excretionGO416
extracellular ligand-gated ion channel activityGO214
extracellular matrix structural constituentGO122
eye photoreceptor cell fate commitmentGO80 200 259
fatty acid beta-oxidationGO185 221
fatty acid biosynthesisGO326 462
Fatty Acid DegradationGenMapp184 221
fatty acid oxidationGO185 221
Fc receptor activityGO424 478
Fetal_brain_1Tissue11 66 100 137
Fetal_brain_2Tissue11 66 100 137
Fetal_liver_1Tissue24 55 88
Fetal_liver_2Tissue24 55 88
fibrillar collagenGO513
GA10_1Tissue53 118
GA10_2Tissue53 118
GABA-A receptor activityGO215
galactose bindingGO391 543
gap-junction forming channel activityGO482 544
gap junctionGO482 544
Garber01 10Clusters49 95 163
Garber01 19Clusters67
Garber01 20Clusters486
Garber01 23Clusters54
Garber01 28Clusters441
Garber01 30Clusters534
Garber01 31Clusters47
Garber01 35Clusters312 439
Garber01 43Clusters83 114 151
Garber01 45Clusters84
Garber01 48Clusters372 441
Garber01 49Clusters95 163
Garber01 4Clusters154 297 357
Garber01 50Clusters205
glutathione conjugation reactionGO101 132 310
Glutathione_metabolismKEGG310
glutathione peroxidase activityGO530
glutathione transferase activityGO101 132 310
Glycerolipid_metabolismKEGG557
Glycolysis and GluconeogenesisGenMapp377
glycolysisGO306
glycosaminoglycan bindingGO385
glycosaminoglycan metabolismGO509
Golub99 11Clusters20 111 157 242 379
Golub99 12Clusters120 175 241 291
Golub99 15Clusters105
Golub99 17Clusters83 114 151
Golub99 18Clusters111 157 242 379
Golub99 19Clusters120 175 241 291
Golub99 1Clusters120 175 241 291
Golub99 23Clusters112 176
Golub99 24Clusters175 241 291
Golub99 30Clusters175 241 291
Golub99 31Clusters111 157 242 379
Golub99 32Clusters33
Golub99 41Clusters120 175 241 291
Golub99 42Clusters120 175 241 291
Golub99 43Clusters120 175 241 291
Golub99 44Clusters157 242 379
Golub99 45Clusters204
Golub99 46Clusters400
Golub99 48Clusters111 157 242 379
Golub99 49Clusters113 176
Golub99 7Clusters151
Golub99 8Clusters501
GPCRs, Class A Rhodopsin-like 2GenMapp571
GPCRs, Class B Secretin-likeGenMapp470 557
GPCRs, Class C Metabotropic glutamate, pheromoneGenMapp493
GPI-anchored membrane-bound receptorGO328 415
G-protein chemoattractant receptor activityGO288 375
G-protein coupled receptor activityGO146
G-protein coupled receptor protein signaling pathwayGO289 375
G-protein signaling\, adenylate cyclase activating pathwayTissue454 575
G-protein signaling\, coupled to IP3 second messenger (phospholipase C activating)Tissue367
growth factor activityGO433
growth factor bindingGO190 474
GTPase activityGO86
GTP bindingGO87
guanylate cyclase activityGO445 516
Heart_1Tissue60 88
Heart_2Tissue60 88
heat shock protein activityGO355
hematopoietin/interferon-class (D200-domain) cytokine receptor activityGO265
Heme BiosynthesisGenMapp227 539
heme biosynthesisGO335 505
hemostasisGO131
Hep3b_1Tissue8 52 118
Hep3b_2Tissue8 52 118
heparin bindingGO385
heterocycle metabolismGO376 450 538
heterophilic cell adhesionGO410
hexosaminidase activityGO408 491 568
Histidine_metabolismKEGG373
histogenesisGO153 297 357
HL60_1Tissue16 53 118
HL60_2Tissue16 53 118
hormone activityGO382
hormone metabolismGO445 516
host-pathogen interactionGO254 312 439
humoral immune responseGO75
HUVEC_1Tissue52 118
HUVEC_2Tissue3 52 118
HUVEC_3Tissue3 52 118
hydrogen-exporting ATPase activity\, phosphorylative mechanismTissue402 492 568
hydrogen ion transporter activityGO62 152
hydrolase activityGO151
hydrolase activity\, hydrolyzing O-glycosyl compoundsTissue492 568
hydro-lyase activityGO295 343
immune responseGO46 75
immunoglobulin receptor activityGO424 478
induction of programmed cell deathGO300 399
inflammatory responseGO76
inner membraneGO62 152
inorganic anion transportGO141 396 489
inositol/phosphatidylinositol kinase activityGO421 534
inotropic glutamate receptor activityGO498
insulin-like growth factor bindingGO190 474
integral to plasma membraneGO64
integrin complexGO275 412
integrin-mediated signaling pathwayGO275 412
interleukin-1 receptor activityGO496 545
interleukin-1\, Type I\, activating receptor activityTissue496 545
interleukin bindingGO73 265
interleukin receptor activityGO73 265
intermediate filamentGO68 298 357
intracellular transportGO196 253
ion channel activityGO316 415
ion transporter activityGO62 152
ion transportGO316 415
iron ion homeostasisGO540
Iyer99 14Clusters447
Iyer99 15Clusters511
Iyer99 17Clusters54
Iyer99 31Clusters151
Iyer99 34Clusters418 455
Iyer99 44Clusters372 441
Iyer99 4Clusters418 455
Iyer99 9Clusters426
K422_1Tissue53 118
K422_2Tissue53 118
Kidney_1Tissue55 88
Kidney_2Tissue55 88
Kidney_3Tissue55 88
kinase activityGO160
kinesin complexGO438 533
kinetochoreGO315
large ribosomal subunitGO83 114 151
Lessnick02 15Clusters104 181 242 379
Lessnick02 18Clusters340
Lessnick02 20Clusters54
Lessnick02 25Clusters13 41 104 181 242 379
Lessnick02 26Clusters181 242 379
Lessnick02 36Clusters104 181 242 379
Lessnick02 38Clusters117
Lessnick02 3Clusters104 181 242 379
Lessnick02 48Clusters379
Lessnick02 4Clusters83 114 151
leukotriene biosynthesisGO326 462
ligand-gated ion channel activityGO214
ligase activity\, forming aminoacyl-tRNA and related compoundsTissue35 110 160
ligase activity\, forming carbon-nitrogen bondsTissue278
ligase activity\, forming phosphoric ester bondsTissue35 110 160
lipase activityGO401
lipid catabolismGO417
lipoprotein bindingGO557
lipoprotein biosynthesisGO236
Liver_1Tissue23 55 88
Liver_2Tissue23 55 88
Lung_1Tissue5
Lung_2Tissue5
Lymphoblastic_molt-4_1Tissue53 118
Lymphoblastic_molt-4_2Tissue53 118
Lymphoblastic_molt-4_3Tissue53 118
lymphocyte activationGO121 223
lymphocyte antigenGO501
lymphocyte proliferationGO521
Lysine_degradationKEGG305
macromolecule catabolismGO211 562
magnesium ion bindingGO471 528
main pathways of carbohydrate metabolismGO306
MAPKKK cascadeGO173 407 465 560
MAPKKK cascade (osmolarity sensing)GO407 465 560
Matrix MetalloproteinasesGenMapp562
membrane lipid catabolismGO260 346 408 491 568
membrane lipid metabolismGO346 408 491 568
mesoderm developmentGO400
metal ion bindingGO324
metal ion homeostasisGO191 262
metal ion transporter activityGO22 62 152
metallocarboxypeptidase activityGO231 402 492 568
metalloendopeptidase activityGO210 562
metallopeptidase activityGO210 562
methyltransferase activityGO349
MHC class I receptor activityGO144 293 345 436
microtubule associated complexGO438 533
microtubule-based processGO253
microtubule cytoskeletonGO438 533
microtubuleGO395 509
mitochondrial electron transport\, NADH to ubiquinoneTissue25 77 152
mitochondrial inner membraneGO152
mitochondrial membraneGO62 152
mitochondrionGO152
mitotic anaphaseGO397
mitotic checkpointGO315
Monoamine GPCRsGenMapp372 441
monocarboxylic acid transporter activityGO0 71 186 341 411 511
monocarboxylic acid transportGO0 71 186 341 411 511
monosaccharide bindingGO391 543
monovalent inorganic cation transporter activityGO62 152
morphogenesisGO220
motor activityGO196 253
M phaseGO320 397
M phase of mitotic cell cycleGO320 397
mRNA bindingGO183
mRNA processingGO332
mRNA splicingGO183
muscle contractionGO201 329 387 512
muscle developmentGO329 387 512
muscle fiberGO202 329 387 512
Myelogenous_k-562_1Tissue17 52 118
Myelogenous_k-562_2Tissue17 52 118
NADH dehydrogenase activityGO42 77 152
NADH dehydrogenase (ubiquinone) activityGO42 77 152
negative regulation of cell proliferationGO488
neurotransmitter receptor activityGO215
neurotransmitter secretionGO563
Nicotinate_and_nicotinamide_metabolismKEGG303 403 451
nicotinic acetylcholine-activated cation-selective channel activityGO216 267 328 415
nicotinic acetylcholine-gated receptor-channel complexGO216 267 328 415
Nitrogen_metabolismKEGG294 343
nuclear chromatinGO89 203 552
nuclear chromosomeGO168 222 421 534
nuclear divisionGO320 397
nuclear laminaGO68 298 357
nuclear membraneGO298 357
nuclear poreGO352
nuclease activityGO32 83 114 151
nucleic acid bindingGO32 83 114 151
nucleobase metabolismGO376 450 538
nucleolar preribosomeGO525
nucleolusGO392 457
nucleoside monophosphate biosynthesisGO21 56 102 219
nucleoside monophosphate phosphorylationGO116 152
nucleosome assemblyGO90 203 552
nucleosome disassemblyGO90 203 552
nucleotide bindingGO538
nucleotide biosynthesisGO102 219
Nucleotide MetabolismGenMapp337 397
nucleotide metabolismGO219
nucleotide receptor activityGO328 415
nucleotidyltransferase activityGO244
nucleusGO98 198 252
Nutt03 10Clusters501
Nutt03 14Clusters36
Nutt03 15Clusters83 114 151
Nutt03 16Clusters137
Nutt03 18Clusters400
Nutt03 23Clusters137
Nutt03 26Clusters66 100 137
Nutt03 36Clusters41 104 181 242 379
Nutt03 38Clusters104 181 242 379
Nutt03 41Clusters41 104 181 242 379
Nutt03 43Clusters13 41 104 181 242 379
Nutt03 44Clusters117
organellar ribosomeGO377
organic acid biosynthesisGO327 462
organic acid metabolismGO40
organic acid transporter activityGO71 186 341 411 511
organic acid transportGO186 341 411 511
organogenesisGO220
ossificationGO400
Ovary_2Tissue1
Ovary_3Tissue1
oxidative phosphorylationGO77 152
Oxidative_phosphorylationKEGG62 152
oxidoreductase activity\, acting on CH-OH group of donorsTissue286
oxidoreductase activity\, acting on paired donors\, with incorporation or reduction of molecular oxygen\, 2-oxoglutarate as one donor\, and incorporation of one atom each of oxygen into both donorsTissue423 478
oxidoreductase activity\, acting on paired donors\, with incorporation or reduction of molecular oxygenTissue135
oxidoreductase activity\, acting on paired donors\, with incorporation or reduction of molecular oxygen\, reduced flavin or flavoprotein as one donor\, and incorporation of one atom of oxygenTissue106 135
oxidoreductase activity\, acting on single donors with incorporation of molecular oxygenTissue423 478
oxidoreductase activity\, acting on the aldehyde or oxo group of donors\, NAD or NADP as acceptorTissue194 464
oxidoreductase activity\, acting on the aldehyde or oxo group of donorsTissue194 464
oxidoreductase activity\, acting on the CH-CH group of donors\, other acceptorsTissue294 343
oxidoreductase activity\, acting on the CH-CH group of donorsTissue184 221
oxidoreductase activity\, acting on the CH-NH2 group of donorsTissue373
oxidoreductase activity\, acting on the CH-NH group of donors\, NAD or NADP as acceptorTissue224 272 377
oxidoreductase activity\, acting on the CH-NH group of donorsTissue224 272 377
oxidoreductase activity\, acting on the CH-OH group of donors\, NAD or NADP as acceptorTissue286
oxidoreductase activityGO93
oxygen and reactive oxygen species metabolismGO132 310
Pancreas_1Tissue55 88
Pancreas_2Tissue55 88
pancreatic ribonuclease activityGO467
pathogenesisGO501
pattern specificationGO362 444 516
peptidase activityGO209
peptide bindingGO155 245 299 355
Peptide GPCRsGenMapp288 375
peptide hormoneGO382
peptide receptor activityGO134 288 375
peptide receptor activity\, G-protein coupledTissue134 288 375
peptide transporter activityGO162 218 368 511
perception of lightGO287 373
perception of mechanical stimulusGO571
peripheral nervous system developmentGO560
Perou00 13Clusters342
Perou00 17Clusters389
Perou00 18Clusters84
Perou00 22Clusters83 114 151
Perou00 25Clusters239
Perou00 28Clusters321
Perou00 29Clusters345 436
Perou00 2Clusters139 180 342
Perou00 31Clusters47
Perou00 34Clusters26 207 389
Perou00 35Clusters207 389
Perou00 36Clusters207 389
Perou00 39Clusters206 389
Perou00 40Clusters239
Perou00 41Clusters154 297 357
Perou00 42Clusters84
Perou00 43Clusters321
Perou00 45Clusters403 451
Perou00 46Clusters207 389
Perou00 49Clusters372 441
Perou00 6Clusters54
Perou00 7Clusters448
Perou99 10Clusters333 427 480
Perou99 11Clusters192 279 334 427 480
Perou99 13Clusters156 240 313 547
Perou99 14Clusters279 334 427 480
Perou99 15Clusters192 279 334 427 480
Perou99 17Clusters156 240 313 547
Perou99 18Clusters313 547
Perou99 1Clusters503 576
Perou99 20Clusters156 240 313 547
Perou99 21Clusters503 576
Perou99 22Clusters333 427 480
Perou99 23Clusters503 576
Perou99 24Clusters147 195 356 503 576
Perou99 25Clusters195 356 503 576
Perou99 26Clusters240 313 547
Perou99 27Clusters156 240 313 547
Perou99 28Clusters333 427 480
Perou99 29Clusters166 256 333 427 480
Perou99 2Clusters166 256 333 427 480
Perou99 31Clusters333 427 480
Perou99 33Clusters256 333 427 480
Perou99 35Clusters156 240 313 547
Perou99 36Clusters356 503 576
Perou99 37Clusters147 195 356 503 576
Perou99 38Clusters480
Perou99 39Clusters447
Perou99 3Clusters156 240 313 547
Perou99 41Clusters156 240 313 547
Perou99 42Clusters547
Perou99 43Clusters156 240 313 547
Perou99 44Clusters192 279 334 427 480
Perou99 45Clusters240 313 547
Perou99 47Clusters576
Perou99 48Clusters421 534
Perou99 49Clusters256 333 427 480
Perou99 4Clusters156 240 313 547
Perou99 5Clusters156 240 313 547
Perou99 6Clusters547
Perou99 7Clusters439
Perou99 8Clusters334 427 480
Perou99 9Clusters503 576
phenylalanine catabolismGO140
phenylalanine metabolismGO140
phosphatase regulator activityGO226 281 371
phosphate metabolismGO273 363
phospholipase inhibitor activityGO390 543
phospholipid bindingGO414
phosphoric ester hydrolase activityGO534
phosphorus metabolismGO273 363
photosynthesisGO43
photosynthesis\, light reactionTissue43
pigmentationGO335 505
pigment biosynthesisGO335 505
Pituitary_glandTissue66 100 137
Placenta_1Tissue38
Placenta_2Tissue38
Pollack99 10Clusters495
Pollack99 13Clusters533
Pollack99 22Clusters457
Pollack99 23Clusters485
Pollack99 27Clusters325 485
Pollack99 29Clusters243
Pollack99 32Clusters439
Pollack99 35Clusters342
Pollack99 44Clusters325 485
polysaccharide transporter activityGO311 573
Pomeroy02 10Clusters111 157 242 379
Pomeroy02 12Clusters416
Pomeroy02 13Clusters111 157 242 379
Pomeroy02 14Clusters83 114 151
Pomeroy02 16Clusters500
Pomeroy02 20Clusters176
Pomeroy02 21Clusters138 174 241 291
Pomeroy02 31Clusters66 100 137
Pomeroy02 32Clusters100 137
Pomeroy02 36Clusters291
Pomeroy02 40Clusters157 242 379
Pomeroy02 41Clusters176
Pomeroy02 46Clusters497
Pomeroy02 49Clusters111 157 242 379
Pomeroy02 9Clusters113 176
pore complexGO352
porin activityGO63
Porphyrin_and_chlorophyll_metabolismKEGG227 539
porter activityGO368 511
positive regulation of cell proliferationGO521
post-embryonic developmentGO51 80 200 259
post-embryonic morphogenesisGO51 80 200 259
potassium channel activityGO498
potassium ion transportGO498
P-P-bond-hydrolysis-driven transporter activityGO283 337 397
pre-mRNA splicing factor activityGO183
primary active transporter activityGO283 337 397
programmed cell deathGO300 399
Propanoate_metabolismKEGG184 221
Prostaglandin_and_leukotriene_metabolismKEGG431
proteasome complex (sensu Eukarya)GO91
proteasome core complex (sensu Eukarya)GO50 91
Proteasome DegradationGenMapp91
proteasome endopeptidase activityGO50 91
ProteasomeKEGG28 91
protein amino acid dephosphorylationGO498
protein biosynthesisGO83 114 151
protein catabolismGO211 562
protein disulfide oxidoreductase activityGO519
protein-disulfide reductionGO25 77 152
Protein_exportKEGG149
protein foldingGO155 245 299 355
protein kinase activityGO199 259
protein phosphatase regulator activityGO226 281 371
protein phosphatase type 2A activityGO233 278
proteolysis and peptidolysisGO107 172 209
proton-dependent oligopeptide transporter activityGO162 218 368 511
proton transportGO116 152
proton-transporting ATP synthase complex (sensu Eukarya)GO414
Purine_metabolismKEGG219
purine nucleoside monophosphate biosynthesisGO31 56 102 219
purine nucleotide biosynthesisGO219
purine ribonucleoside monophosphate biosynthesisGO56 102 219
purine ribonucleoside monophosphate metabolismGO31 56 102 219
purine ribonucleotide biosynthesisGO102 219
Pyrimidine_metabolismKEGG337 397
Ramaswamy01 10Clusters165
Ramaswamy01 12Clusters165
Ramaswamy01 15Clusters165
Ramaswamy01 18Clusters111 157 242 379
Ramaswamy01 22Clusters112 176
Ramaswamy01 25Clusters383 441
Ramaswamy01 26Clusters165
Ramaswamy01 28Clusters105
Ramaswamy01 29Clusters322 379
Ramaswamy01 32Clusters165
Ramaswamy01 33Clusters83 114 151
Ramaswamy01 34Clusters165
Ramaswamy01 35Clusters418 455
Ramaswamy01 36Clusters165
Ramaswamy01 37Clusters165
Ramaswamy01 38Clusters165
Ramaswamy01 3Clusters177
Ramaswamy01 40Clusters242 379
Ramaswamy01 41Clusters322 379
Ramaswamy01 44Clusters112 176
Ramaswamy01 48Clusters567
Ramaswamy01 4Clusters112 176
Ramaswamy01 5Clusters165
Ramaswamy01 6Clusters20 111 157 242 379
Ramaswamy01 8Clusters111 157 242 379
Ramos_1Tissue53 118
Ramos_2Tissue53 118
receptor activityGO27 64
Reductive_carboxylate_cycle_CO2_fixationKEGG305
regulation of catabolismGO107 172 209
regulation of cell adhesionGO444 516
regulation of cell growthGO474
regulation of cell proliferationGO488
regulation of complement activationGO58 130
regulation of neurotransmitter levelsGO563
regulation of T-cell proliferationGO521
regulation of transcription by pheromonesGO229 318 403 451
regulation of transcription\, DNA-dependentTissue197 252
regulation of translational initiationGO81 115 149
replication forkGO158
response to biotic stimulusGO46 75
response to DNA damage stimulusGO403 451
response to lightGO248
response to oxidative stressGO530
response to pest/pathogen/parasiteGO75
response to radiationGO248
response to stressGO75
rhodopsin-like receptor activityGO146
rhodopsin mediated phototransductionGO251 367
rhodopsin mediated signalingGO251 367
ribonuclease activityGO360 439
ribonucleoprotein complexGO83 114 151
ribonucleoside monophosphate biosynthesisGO56 102 219
ribonucleoside monophosphate metabolismGO21 56 102 219
ribonucleotide biosynthesisGO102 219
ribonucleotide metabolismGO219
ribosomeGO83 114 151
RibosomeKEGG83 114 151
RNA bindingGO32 83 114 151
RNA metabolismGO183
RNA processingGO183
RNA splicingGO183
Rosenwald01 11Clusters292 345 436
Rosenwald01 13Clusters525
Rosenwald01 14Clusters292 345 436
Rosenwald01 16Clusters429 484
Rosenwald01 17Clusters350
Rosenwald01 18Clusters136 179 255 317 378 459 532
Rosenwald01 19Clusters97 182 261 358 525
Rosenwald01 1Clusters136 179 255 317 378 459 532
Rosenwald01 22Clusters430 484
Rosenwald01 24Clusters69 136 179 255 317 378 459 532
Rosenwald01 25Clusters456
Rosenwald01 26Clusters459 532
Rosenwald01 27Clusters255 317 378 459 532
Rosenwald01 31Clusters188 238 301 361 436
Rosenwald01 32Clusters37 69 136 179 255 317 378 459 532
Rosenwald01 33Clusters97 182 261 358 525
Rosenwald01 34Clusters170
Rosenwald01 36Clusters169
Rosenwald01 38Clusters456
Rosenwald01 39Clusters277 358 525
Rosenwald01 3Clusters261 358 525
Rosenwald01 40Clusters238 301 361 436
Rosenwald01 42Clusters237 301 361 436
Rosenwald01 43Clusters525
Rosenwald01 45Clusters61 126
Rosenwald01 46Clusters54
Rosenwald01 48Clusters238 301 361 436
Rosenwald01 4Clusters456
Rosenwald01 50Clusters436
Rosenwald01 6Clusters79 128 170
Rosenwald01 8Clusters500
Rosenwald01 9Clusters145 188 238 301 361 436
Ross00 10Clusters491 568
Ross00 12Clusters491 568
Ross00 15Clusters342
Ross00 18Clusters332
Ross00 20Clusters180 342
Ross00 23Clusters151
Ross00 2Clusters418 455
Ross00 3Clusters180 342
Ross00 40Clusters455
Ross00 44Clusters331
Ross00 47Clusters525
Ross00 50Clusters321
Ross01 10Clusters372 441
Ross01 12Clusters342
Ross01 14Clusters342
Ross01 17Clusters389
Ross01 19Clusters151
Ross01 2Clusters337 397
Ross01 30Clusters485
Ross01 35Clusters139 180 342
Ross01 36Clusters207 389
Ross01 39Clusters154 297 357
Ross01 43Clusters372 441
Ross01 46Clusters341 411 511
Ross01 49Clusters331
Ross01 7Clusters47
Ross01 8Clusters342
rRNA processingGO392 457
Salivary_gland_1Tissue88
Salivary_gland_2Tissue55 88
sarcomereGO202 329 387 512
secretin-like receptor activityGO470 557
secretionGO92
secretory vesicleGO563
sensory perceptionGO123 197 252
serine protease inhibitor activityGO164
serotonin metabolismGO563
Shipp02 10Clusters112 176
Shipp02 11Clusters113 176
Shipp02 12Clusters138 174 241 291
Shipp02 13Clusters83 114 151
Shipp02 16Clusters372 441
Shipp02 20Clusters111 157 242 379
Shipp02 23Clusters112 176
Shipp02 25Clusters532
Shipp02 26Clusters177
Shipp02 27Clusters138 174 241 291
Shipp02 28Clusters105
Shipp02 2Clusters340
Shipp02 31Clusters379
Shipp02 32Clusters70 138 174 241 291
Shipp02 35Clusters176
Shipp02 37Clusters174 241 291
Shipp02 41Clusters157 242 379
Shipp02 42Clusters111 157 242 379
Shipp02 43Clusters242 379
Shipp02 45Clusters70 138 174 241 291
Shipp02 47Clusters20 111 157 242 379
Shipp02 4Clusters426
Shipp02 5Clusters105
Shipp02 8Clusters33
Shipp02 9Clusters112 176
signal sequence bindingGO245 299 355
signal transducer activityGO64
Singh02 10Clusters7 41 104 181 242 379
Singh02 12Clusters41 104 181 242 379
Singh02 13Clusters13 41 104 181 242 379
Singh02 20Clusters13 41 104 181 242 379
Singh02 22Clusters83 114 151
Singh02 23Clusters104 181 242 379
Singh02 26Clusters129
Singh02 2Clusters13 41 104 181 242 379
Singh02 30Clusters383 441
Singh02 35Clusters204
Singh02 38Clusters83 114 151
Singh02 3Clusters13 41 104 181 242 379
Singh02 42Clusters7 41 104 181 242 379
Singh02 43Clusters204
Singh02 46Clusters204
Singh02 5Clusters13 41 104 181 242 379
Singh02 6Clusters104 181 242 379
Singh02 9Clusters36
single-stranded DNA bindingGO281 371
skeletal developmentGO234
small molecule transportGO415
small monomeric GTPase activityGO86
small nuclear ribonucleoproteinGO388
small nucleolar ribonucleoprotein complexGO388
small protein conjugating enzyme activityGO4 82
small ribosomal subunitGO29 83 114 151
sodium ion transporter activityGO22 62 152
Sorlie01 16Clusters239
Sorlie01 19Clusters453
Sorlie01 20Clusters84
Sorlie01 28Clusters453
Sorlie01 2Clusters285 366 453
Sorlie01 30Clusters567
Sorlie01 33Clusters54
Sorlie01 34Clusters285 366 453
Sorlie01 37Clusters239
Sorlie01 40Clusters284 366 453
Sorlie01 43Clusters206 389
Sorlie01 48Clusters47
Sorlie01 49Clusters342
Sorlie01 5Clusters284 366 453
Sorlie01 7Clusters26 207 389
Sorlie01 9Clusters207 389
S phase of mitotic cell cycleGO125 158
sphingolipid catabolismGO260 346 408 491 568
Spinal_cord_1Tissue12
Spinal_cord_2Tissue12
spindleGO315
SpleenTissue84
spliceosome complexGO388
Staunton01 11Clusters571
Staunton01 12Clusters213
Staunton01 15Clusters112 176
Staunton01 16Clusters470 557
Staunton01 18Clusters213
Staunton01 19Clusters372 441
Staunton01 26Clusters511
Staunton01 34Clusters213
Staunton01 38Clusters59
Staunton01 3Clusters112 176
Staunton01 40Clusters83 114 151
Staunton01 41Clusters213
Staunton01 42Clusters501
Staunton01 44Clusters213
Staunton01 45Clusters59
Staunton01 46Clusters213
Staunton01 48Clusters512
Staunton01 49Clusters242 379
Staunton01 4Clusters383 441
steroid bindingGO404
Sterol_biosynthesisKEGG432
striated muscle contractionGO201 329 387 512
striated muscle thick filamentGO201 329 387 512
structural constituent of muscleGO201 329 387 512
structural constituent of ribosomeGO83 114 151
sugar bindingGO96 410
sulfur amino acid biosynthesisGO354
sulfur amino acid catabolismGO428 471 528
sulfur metabolismGO235
symporter activityGO218 368 511
synaptic transmissionGO274 379
synaptic vesicleGO381 498
taxisGO108 263
TCA CycleGenMapp306
T-cell activationGO121 223
Terpenoid_biosynthesisKEGG509
Testis_1Tissue72
Testis_2Tissue72
Thalamus_1Tissue11 66 100 137
Thalamus_2Tissue11 66 100 137
thermoregulationGO76
THY-_1Tissue15 53 118
THY-_2Tissue15 53 118
Thymus_1Tissue44 84
Thymus_2Tissue44 84
THY+Tissue53 118
Trachea_1Tissue6
Trachea_2Tissue6
transcription\, DNA-dependentTissue124
transcription factor activityGO372 441
transcription from Pol II promoterGO308
transcription from Pol I promoterGO331
transcriptionGO124
transcription regulator activityGO198 252
transferase activity\, transferring acyl groupsTissue249 377
transferase activity\, transferring glycosyl groupsTissue377
transferase activity\, transferring groups other than amino-acyl groupsTissue249 377
transferase activity\, transferring one-carbon groupsTissue349
transferase activity\, transferring pentosyl groupsTissue377
transition metal ion bindingGO280 371
transition metal ion homeostasisGO540
translational elongationGO150
translational initiationGO81 115 149
translation elongation factor activityGO150
translation factor activity\, nucleic acid bindingTissue159
Translation FactorsGenMapp115 149
translation initiation factor activityGO81 115 149
translation regulator activityGO159
translation release factor activityGO87
transmembrane receptor activityGO27 64
transmembrane receptor protein kinase activityGO85 199 259
transmembrane receptor protein phosphatase activityGO498
transmembrane receptor protein tyrosine kinase activityGO85 199 259
transmembrane receptor protein tyrosine kinase signaling pathwayGO200 259
transmission of nerve impulseGO379
tricarboxylic acid cycleGO377
tRNA ligase activityGO35 110 160
trypsin activityGO109
tumor necrosis factor receptor bindingGO426
two-component signal transduction system (phosphorelay)GO173 407 465 560
Tyrosine_metabolismKEGG373
ubiquinol-cytochrome c reductase activityGO149
Ubiquinone_biosynthesisKEGG77 152
ubiquitin conjugating enzyme activityGO4 82
ubiquitin cycleGO82
Urea_cycle_and_metabolism_of_amino_groupsKEGG440
vacuolar hydrogen-transporting ATPaseGO307
vesicle coatGO39 264 395 509
vesicle-mediated transportGO274 379
vesicle membraneGO381 498
viral genomeGO89 203 552
viral host cell process manipulationGO403 451
viral host defense evasionGO254 312 439
virionGO89 203 552
visionGO287 373
vitamin bindingGO404
voltage-gated ion channel activityGO383 441
voltage-gated potassium channel complexGO498
Whitfield02 15Clusters163
Whitfield02 20Clusters239
Whitfield02 22Clusters95 163
Whitfield02 34Clusters54
Whitfield02 45Clusters323
Whitfield02 46Clusters95 163
Whitfield02 49Clusters9 48 95 163
Whitfield02 8Clusters486
Whitfield02 9Clusters212
Whole_Blood_1Tissue45 84
Whole_Blood_2Tissue45 84
Whole_Blood_3Tissue45 84
Whole_Blood_4Tissue45 84
Whole_Blood_5Tissue45 84
Whole_Blood_6Tissue45 84
Whole_Brain_1Tissue11 66 100 137
Whole_Brain_2Tissue11 66 100 137
WSU_1Tissue53 118
WSU_2Tissue53 118
xenobiotic metabolismGO247
zinc ion bindingGO280 371